All functions
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bioentity_diseases_assoc_w_gene()
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Gets diseases associated with a gene. |
bioentity_exp_anatomy_assoc_w_gene()
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Gets expression anatomy associated with a gene. |
bioentity_gene_info()
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Gets gene info, like catgories and labels for a gene. |
bioentity_genes_assoc_w_disease()
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Get genes associated with a disease |
bioentity_homologs()
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Gets homologs for a gene. |
bioentity_id_type()
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Gets info of a 'type' from an 'id' |
bioentity_interactions_assoc_w_gene()
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Gets interactions associated with a gene. |
bioentity_pathways_assoc_w_gene()
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Gets pathways associated with a gene. |
bioentity_phenotypes_assoc_w_gene()
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Gets phenotypes associated with a gene. |
biolink_search()
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Get a list of results matching a search term. |
build_monarch_url()
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Builds URL for a monarch GET request. |
clean_query()
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Converts R booleans to monarch_api values and drops NULL parameters from query list. |
extract_be_content()
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Extracts simplified content from response. |
extract_matching_phrases_from_lists()
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Finds phrases from list of things, like a list of dataframes. |
flatten_list_of_strings()
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Flattens and concatenates character vectors in a list |
list_of_paths_to_basenames()
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Extracts and concatenates (possibly multiple) basenames from paths. |
monarch_api()
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Gets response from monarch API. |
print(<monarch_api>)
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Print method for monarch_api. |